GRaSP (TETRAD)

Module name	tetrad_grasp
Package	TETRAD
Version	1.10.0
Language	Java
Docs	here
Paper	Lam et al.[1]
Graph type	CPDAG
MCMC	No
Edge constraints	Yes
Data type	C, D
Data missingness
Intervention type
Docker	bpimages/causal-cmd:1.10.0

Greedy relaxation of the sparsest permutation

Greedy relaxation of the sparsest permutation (GRaSP) algorithm.

Some fields described

edgeConstraints Name of the JSON file containing background knowledge

Example JSON

[
  {
    "id": "grasp-bic",
    "score": "sem-bic-score",
    "datatype": "continuous",
    "test": "fisher-z-test",
    "samplePrior": null,
    "semBicStructurePrior": 1,
    "penaltyDiscount": [
      0.8,
      1,
      1.5
    ],
    "timeout": null,
    "edgeConstraints": "edgeConstraints.json"
  },
  {
    "id": "grasp-bdeu",
    "score": "bdeu-score",
    "test": "chi-square-test",
    "datatype": "discrete",
    "samplePrior": [
      1,
      10,
      20
    ],
    "semBicStructurePrior": null,
    "penaltyDiscount": null,
    "timeout": null,
    "edgeConstraints": "edgeConstraints.json"
  }
]